De novo sequencing of mixture spectra (Liu thesis)
algorithm · Graph / DP
De novo sequencing of mixture spectra (Liu thesis): algorithm · Graph / DP. PhD work on identifying peptides from MIXTURE tandem mass spectra, where two or more peptides co-fragment: formulates the de novo problem for a mixture spectrum and…
PhD work on identifying peptides from MIXTURE tandem mass spectra, where two or more peptides co-fragment: formulates the de novo problem for a mixture spectrum and solves it by dynamic programming.
| Kind | algorithm |
| Deep learning | no |
| Acquisition | DDA |
| Family | Graph / DP |
Papers describing it (3)
- An Effective Algorithm for Peptide de novo Sequencing from Mixture MS/MS Spectra (2014, Lecture Notes in Computer Science, peer-reviewed)
- Algorithms for Peptide Identification from Mixture Tandem Mass Spectra (2015, thesis)
- An Approach for Peptide Identification by De Novo Sequencing of Mixture Spectra (2017, IEEE/ACM Transactions on Computational Biology and Bioinformatics, peer-reviewed)