Kaizhong Zhang
13 papers in the catalog · Canada
Kaizhong Zhang: 13 papers in the catalog · Canada · University of Western Ontario, Western University · Works on De novo assisted mixture spectrum characterization, De novo sequencing of mixture spectra (Liu thesis), Gapped sequence tag automata…
Affiliations
- University of Western Ontario · Department of Computer Science
- Western University
Elsewhere
Papers
- An algorithm for peptide de novo sequencing from a group of SILAC labeled MS/MS spectra (2025, Journal of Bioinformatics and Computational Biology)
- De novo sequencing of multiple SILAC-based tandem mass spectra (2022, 2022 IEEE 21st International Conference on Cognitive Informatics & Cognitive Computing (ICCI*CC))
- An Approach for Peptide Identification by De Novo Sequencing of Mixture Spectra (2017, IEEE/ACM Transactions on Computational Biology and Bioinformatics)
- Spectra library assisted de novo peptide sequencing for HCD and ETD spectra pairs (2016, BMC Bioinformatics)
- De Novo Sequencing Assisted Approach for Characterizing Mixture MS/MS Spectra (2016, IEEE Transactions on NanoBioscience)
- An Approach for Matching Mixture MS/MS Spectra with a Pair of Peptide Sequences in a Protein Database (2015, Lecture Notes in Computer Science)
- An Effective Algorithm for Peptide de novo Sequencing from Mixture MS/MS Spectra (2014, Lecture Notes in Computer Science)
- An Automata Approach to Match Gapped Sequence Tags Against Protein Database (2010, Lecture Notes in Computer Science)
- AN AUTOMATA APPROACH TO MATCH GAPPED SEQUENCE TAGS AGAINST PROTEIN DATABASE (2005, International Journal of Foundations of Computer Science)
- SPIDER: software for protein identification from sequence tags with de novo sequencing error (2005, Journal of Bioinformatics and Computational Biology)
- An effective algorithm for peptide de novo sequencing from MS/MS spectra (2005, Journal of Computer and System Sciences)
- PEAKS: powerful software for peptide de novo sequencing by tandem mass spectrometry (2003, Rapid Communications in Mass Spectrometry)
- An Effective Algorithm for the Peptide De Novo Sequencing from MS/MS Spectrum (2003, Lecture Notes in Computer Science)
Theses supervised (5)
- Spectra Fragment-Ion and Amino Acid Probability Prediction for Peptide Sequencing (2026), by Shichao Wang
- Tandem Mass Spectra Representation Design for Transformer-Based De Novo Peptide Sequencing (2026), by Xinlue Shen
- De novo sequencing of multiple tandem mass spectra of peptide containing SILAC labeling (2023), by Fang Han
- Discrimination of Leucine and Isoleucine in De Novo peptide sequencing using deep neural networks (2020), by Bingran Shen
- Algorithms for Peptide Identification from Mixture Tandem Mass Spectra (2015), by Yi Liu
Methods and tools
De novo assisted mixture spectrum characterization, De novo sequencing of mixture spectra (Liu thesis), Gapped sequence tag automata matching, PEAKS, SILAC group de novo, SPIDER, Spectral-library-assisted de novo