NovoLign

downstream-application

NovoLign: downstream-application. Aligns de novo sequences from whole metaproteomics experiments to give rapid taxonomic profiles and to check the coverage of database search results.

Aligns de novo sequences from whole metaproteomics experiments to give rapid taxonomic profiles and to check the coverage of database search results.

Kind	downstream-application
Deep learning	no
Acquisition	DDA
Application area	Metaproteomics

Code

• https://github.com/hbckleikamp/NovoLign

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Papers describing it (2)

• NovoLign: metaproteomics by sequence alignment (2024, ISME Communications, peer-reviewed)
• NovoLign: metaproteomics by sequence alignment (2024, bioRxiv, preprint)

Authors (9)

Hugo B.C. Kleikamp, Ramon van der Zwaan, Ramon van Valderen, Jitske M van Ede, Mario Pronk, Pim Schaasberg, Maximilienne T Allaart, Mark C. M. van Loosdrecht, Martin Pabst

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