OmniNovo

algorithm · Transformer (NAR)

OmniNovo: algorithm · Transformer (NAR). PTM-aware NAR

PTM-aware NAR

Kind	algorithm
Deep learning	yes
Acquisition	DDA
Family	Transformer (NAR)

Code

• https://github.com/BEAM-Labs/denovo/tree/main/OmniNovo

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Paper describing it

• Accurate de novo sequencing of the modified proteome with OmniNovo (2025, arXiv, preprint)

Authors (16)

Yuhan Chen, Shang Qu, Zhiqiang Gao, Yuejin Yang, Xiang Zhang (Shanghai AI Lab), Sheng Xu, Xinjie Mao, Liujia Qian, Jiaqi Wei, Zijie Qiu, Chenyu You, Lei Bai, Ning Ding, Tiannan Guo, Bowen Zhou, Siqi Sun

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