Sheng Xu
8 papers in the catalog · China
Sheng Xu: 8 papers in the catalog · China · Fudan University, Shanghai Artificial Intelligence Laboratory · Works on ContraNovo, CrossNovo, OmniNovo
Affiliations
- Fudan University · Research Institute of Intelligent Complex Systems
- Shanghai Artificial Intelligence Laboratory
Papers
- Accurate de novo sequencing of the modified proteome with OmniNovo (2025, arXiv)
- Bidirectional Representations Augmented Autoregressive Biological Sequence Generation (2025, NeurIPS 2025)
- Curriculum Learning for Biological Sequence Prediction: The Case of De Novo Peptide Sequencing (2025, ICML 2025)
- Distilling Non-Autoregressive Model Knowledge for Autoregressive De Novo Peptide Sequencing (2025, ICLR 2025)
- π-PrimeNovo: an accurate and efficient non-autoregressive deep learning model for de novo peptide sequencing (2025, Nature Communications)
- RankNovo: A Universal Reranking Approach for Robust De Novo Peptide Sequencing (2024, ICLR 2025)
- π-PrimeNovo: an accurate and efficient non-autoregressive deep learning model for de novo peptide sequencing (2024, bioRxiv)
- ContraNovo: A Contrastive Learning Approach to Enhance De Novo Peptide Sequencing (2024, AAAI 2024)
Methods and tools
ContraNovo, CrossNovo, OmniNovo, RankNovo, RefineNovo, π-PrimeNovo