Stan Z. Li

9 papers in the catalog · China

Stan Z. Li: 9 papers in the catalog · China · Westlake University, Westlake University · Works on AdaNovo, Comprehensive Review of DL-Based De Novo Peptide Sequencing, Living proteomics benchmark

Affiliations

Westlake University · AI Department, School of Engineering
Westlake University · School of Engineering

Elsewhere

ORCID 0000-0002-2961-8096 · OpenAlex

Papers

A living proteomics benchmark for comprehensive evaluation of deep learning-based de novo peptide sequencing tools (2026, Nature Methods (Registered Report))
A Comprehensive and Systematic Review for Deep Learning-Based De Novo Peptide Sequencing (2025, IJCAI 2025)
Bridging the Gap between Database Search and De Novo Peptide Sequencing with SearchNovo (2025, ICLR 2025)
NovoBench: Benchmarking Deep Learning-based De Novo Sequencing Methods in Proteomics (2024, NeurIPS 2024)
AdaNovo: Towards Robust De Novo Peptide Sequencing in Proteomics against Data Biases (2024, NeurIPS 2024)
ReNovo: Retrieval-Based De Novo Mass Spectrometry Peptide Sequencing (2024, ICLR 2025)
Bridging the Gap between Database Search and De Novo Peptide Sequencing with SearchNovo (2024, bioRxiv)
NovoBench: Benchmarking Deep Learning-based De Novo Peptide Sequencing Methods in Proteomics (2024, arXiv)
AdaNovo: Adaptive De Novo Peptide Sequencing with Conditional Mutual Information (2024, arXiv)

Methods and tools

AdaNovo, Comprehensive Review of DL-Based De Novo Peptide Sequencing, Living proteomics benchmark, NovoBench, ReNovo, SearchNovo

Co-authors (64)

Ranked by Newman fractional collaboration strength, so a pair on a two-author paper counts for more than a pair on a 50-author consortium paper.

Jingbo Zhou strength 1.21, 9 shared
Jun Xia strength 1.21, 9 shared
Shaorong Chen strength 1.21, 9 shared
Sizhe Liu strength 0.70, 5 shared
Tianze Ling strength 0.69, 5 shared
Wenjie Du strength 0.65, 5 shared
Yue Liu strength 0.54, 4 shared
Hongxin Xiang strength 0.29, 2 shared
Zicheng Liu strength 0.29, 2 shared
Jianwei Yin strength 0.25, 2 shared
Bozhen Hu strength 0.24, 2 shared
Cheng Tan strength 0.24, 2 shared
Zhangyang Gao strength 0.24, 2 shared
Lecheng Zhang strength 0.12, 1 shared
Jiangbin Zheng strength 0.11, 1 shared
Xiaojun Shan strength 0.11, 1 shared
Alfred Nilsson strength 0.02, 1 shared
Baozhen Shan strength 0.02, 1 shared
Benjamin A. Neely strength 0.02, 1 shared
Bin Ma strength 0.02, 1 shared
Ceder Dens strength 0.02, 1 shared
Charlotte Adams strength 0.02, 1 shared
Cheng Chang strength 0.02, 1 shared
Cheng Ge strength 0.02, 1 shared
Chenyu Yao strength 0.02, 1 shared
Christian Nix strength 0.02, 1 shared
Daniela Klaproth-Andrade strength 0.02, 1 shared
Di Zhang strength 0.02, 1 shared
Ekapol Chuangsuwanich strength 0.02, 1 shared
Guillaume Deflandre strength 0.02, 1 shared
Haipeng Wang strength 0.02, 1 shared
Haixu Tang strength 0.02, 1 shared
Jeroen Van Goey strength 0.02, 1 shared
Joel Lapin strength 0.02, 1 shared
Julien Gagneur strength 0.02, 1 shared
Kaiyuan Liu strength 0.02, 1 shared
Konstantinos Kalogeropoulos strength 0.02, 1 shared
Laurent Gatto strength 0.02, 1 shared
Lei Xin strength 0.02, 1 shared
Lukas Käll strength 0.02, 1 shared

Seen in the charts

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