Alfred Nilsson

5 papers in the catalog · Sweden

Alfred Nilsson: 5 papers in the catalog · Sweden · KTH Royal Institute of Technology · Works on Living proteomics benchmark, Pairwise, borgonovo

Affiliations

KTH Royal Institute of Technology · Science for Life Laboratory, Department of Gene Technology

Elsewhere

ORCID 0000-0002-3181-3800

Papers

dIon: Fragmentation-Based Invariance for Self-Supervised Learning of Tandem Mass Spectra (2026, arXiv)
Reference-free protein sequencing by consensus assembly of redundant de novo peptide reads (2026, bioRxiv)
A living proteomics benchmark for comprehensive evaluation of deep learning-based de novo peptide sequencing tools (2026, Nature Methods (Registered Report))
Pairwise Attention: Leveraging Mass Differences to Enhance De Novo Sequencing of Mass Spectra (2025, Journal of Proteome Research)
Pairwise Attention: Leveraging Mass Differences to Enhance De Novo Sequencing of Mass Spectra (2025, bioRxiv)

Methods and tools

Living proteomics benchmark, Pairwise, borgonovo, dIon

Co-authors (57)

Ranked by Newman fractional collaboration strength, so a pair on a two-author paper counts for more than a pair on a 50-author consortium paper.

Lukas Käll strength 1.14, 5 shared
Joel Lapin strength 0.94, 4 shared
Mathias Wilhelm strength 0.94, 4 shared
Samuel H. Payne strength 0.25, 1 shared
Douwe Schulte strength 0.20, 1 shared
Emil Sporre strength 0.20, 1 shared
Fredrik Edfors strength 0.20, 1 shared
Joost Snijder strength 0.20, 1 shared
Baozhen Shan strength 0.02, 1 shared
Benjamin A. Neely strength 0.02, 1 shared
Bin Ma strength 0.02, 1 shared
Ceder Dens strength 0.02, 1 shared
Charlotte Adams strength 0.02, 1 shared
Cheng Chang strength 0.02, 1 shared
Cheng Ge strength 0.02, 1 shared
Chenyu Yao strength 0.02, 1 shared
Christian Nix strength 0.02, 1 shared
Daniela Klaproth-Andrade strength 0.02, 1 shared
Di Zhang strength 0.02, 1 shared
Ekapol Chuangsuwanich strength 0.02, 1 shared
Guillaume Deflandre strength 0.02, 1 shared
Haipeng Wang strength 0.02, 1 shared
Haixu Tang strength 0.02, 1 shared
Jeroen Van Goey strength 0.02, 1 shared
Jingbo Zhou strength 0.02, 1 shared
Julien Gagneur strength 0.02, 1 shared
Jun Xia strength 0.02, 1 shared
Kaiyuan Liu strength 0.02, 1 shared
Konstantinos Kalogeropoulos strength 0.02, 1 shared
Laurent Gatto strength 0.02, 1 shared
Lei Xin strength 0.02, 1 shared
Marina Pominova strength 0.02, 1 shared
Melih Yilmaz strength 0.02, 1 shared
Michael R. Shortreed strength 0.02, 1 shared
Ming Li strength 0.02, 1 shared
Qingyang Xiao strength 0.02, 1 shared
Qixin Liu strength 0.02, 1 shared
Ruitao Wu strength 0.02, 1 shared
Shan Chang strength 0.02, 1 shared
Shaorong Chen strength 0.02, 1 shared

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