TVNovo: De novo peptide sequencing for high resolution LTQ-FT mass spectrometry using virtual database searching

peer-reviewed · 2010 3rd International Conference on Biomedical Engineering and Informatics · 2010

peer-reviewed · 2010 3rd International Conference on Biomedical Engineering and Informatics · 2010. Han-Chang Sun et al.
Date 2010-10-01
Type peer-reviewed
Venue 2010 3rd International Conference on Biomedical Engineering and Informatics
Publisher Institute of Electrical and Electronics Engineers (IEEE)
Contribution algorithm
DOI 10.1109/bmei.2010.5639865
Citations (OpenAlex) 1

Authors

  1. Han-Chang Sun · Beijing Institute of Radiation Medicine, National University of Defense Technology
  2. Ji-Yang Zhang · Beijing Institute of Radiation Medicine, National University of Defense Technology
  3. Hui Liu · Beijing Institute of Radiation Medicine, National University of Defense Technology
  4. Wei Zhang (Changsha) · Beijing Institute of Radiation Medicine, National University of Defense Technology
  5. Chang-Ming Xu · Beijing Institute of Radiation Medicine, National University of Defense Technology
  6. Hai-Bin Ma · Beijing Institute of Radiation Medicine, National University of Defense Technology
  7. Hong-Wei Xie · National University of Defense Technology

Methods and tools

  • TVNovo: Turns de novo sequencing into a search problem by generating a VIRTUAL database per spectrum, enumerating the candidate sequences the precursor mass allows, then scoring them as a database search would. Built for high-resolution LTQ-FT data.

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