Forensics
4 workflows · 2009–2025
Forensics: Attributing a trace to its source, from body fluids to the microbial signature of a place. 4 catalogued workflows and 5 papers.
Attributing a trace to its source, from body fluids to the microbial signature of a place.
| Workflows | 4 |
| Papers | 5 |
| Authors | 25 |
| Active | 2009-05-15 to 2025-06-02 |
Workflows (4)
- Castor bean peptide biomarkers (RCB-1 to -3) (2009): Sequenced three peptide biomarkers from Ricinus communis seeds de novo by MS/MS, for forensic attribution of castor bean extracts that may contain ricin.
- Host blood meal hemoglobin database (2012): De novo sequences haemoglobin from nine North American species with unsequenced genomes, with automated processing and manual validation, to build a database that identifies the host a blood meal came from.
- PNNL forensic metaproteomic characterization (2022): De novo peptide sequencing plus taxonomic assignment and statistical scoring to characterize protein sources in complex forensic samples: a precursor to the MARLOWE tool from the same PNNL group.
- MARLOWE (2025): Computational tool that takes de novo-sequenced peptides from mass spectra of an unknown biological sample and returns a ranked, probabilistic list of source organisms, aimed at forensic biothreat and biodiversity casework.
Papers (5)
- De Novo Sequencing of RCB-1 to -3: Peptide Biomarkers from the Castor Bean PlantRicinus communis (2009, Analytical Chemistry, peer-reviewed)
- Development of a host blood meal database: de novo sequencing of hemoglobin from nine small mammals using mass spectrometry (2012, bchm, peer-reviewed)
- Metaproteomic Characterization of Forensic Samples (2022, SSRN Electronic Journal, preprint)
- MARLOWE: An Untargeted Proteomics, Statistical Approach to Taxonomic Classification for Forensics (2025, Journal of Proteome Research, peer-reviewed)
- MARLOWE: Taxonomic Characterization of Unknown Samples for Forensics Using De Novo Peptide Identification (2025, bioRxiv, preprint)
Sequencing tools these papers used
Where the work happened
Australia, Sweden, USA