Forensics

4 workflows · 2009–2025

Forensics: Attributing a trace to its source, from body fluids to the microbial signature of a place. 4 catalogued workflows and 5 papers.

Attributing a trace to its source, from body fluids to the microbial signature of a place.

Workflows 4
Papers 5
Authors 25
Active 2009-05-15 to 2025-06-02

Workflows (4)

  • Castor bean peptide biomarkers (RCB-1 to -3) (2009): Sequenced three peptide biomarkers from Ricinus communis seeds de novo by MS/MS, for forensic attribution of castor bean extracts that may contain ricin.
  • Host blood meal hemoglobin database (2012): De novo sequences haemoglobin from nine North American species with unsequenced genomes, with automated processing and manual validation, to build a database that identifies the host a blood meal came from.
  • PNNL forensic metaproteomic characterization (2022): De novo peptide sequencing plus taxonomic assignment and statistical scoring to characterize protein sources in complex forensic samples: a precursor to the MARLOWE tool from the same PNNL group.
  • MARLOWE (2025): Computational tool that takes de novo-sequenced peptides from mass spectra of an unknown biological sample and returns a ranked, probabilistic list of source organisms, aimed at forensic biothreat and biodiversity casework.

Papers (5)

Sequencing tools these papers used

Manual MS/MS de novo interpretation

Authors (25)

Alan G. Barbour, Aleksey Y. Ogurtsov, Anthony S. Barente, Calle Nilsson, Christina K. Bagas, David J. Bourne, Dustin L. Crockett, Eric D. Merkley, Erin J. Kaleta, Fanny Chu, Gelio Alves, Inger-Marie E. Vilcins, Jennifer Burg, Kristin H. Jarman, Natalie C. Heller, Natalie C. Heller-Lamar, Sam R. Telford III, Sarah C. Jenson, Simon P. B. Ovenden, Sten-Åke Fredriksson, Stuart A. Thomson, Tomas Bergström, Vicki H. Wysocki, Yi-Kuo Yu, Ünige A. Laskay

Where the work happened

Australia, Sweden, USA

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