PEAKS DB

adjacent · Graph / DP

PEAKS DB: adjacent · Graph / DP. De-novo-assisted DB search

De-novo-assisted DB search

Kind	adjacent
Deep learning	no
Acquisition	DDA
Family	Graph / DP

Papers describing it (2)

• Integrating de Novo Sequencing and Database Search for Peptide Identification (2012, Europe PMC (PubMed Central), abstract)
• PEAKS DB: De Novo Sequencing Assisted Database Search for Sensitive and Accurate Peptide Identification (2012, Molecular & Cellular Proteomics, peer-reviewed)

Papers using it (3)

Applications and evaluations that ran this method. They are not counted among its authors below.

• Protein Identification Strategies for the Greenshell Mussel Perna canaliculus (2021, thesis)
• The Choice of Search Engine Affects Sequencing Depth and HLA Class I Allele-Specific Peptide Repertoires (2021, Molecular & Cellular Proteomics, peer-reviewed)
• Palaeoproteomics gives new insight into early southern African pastoralism (2020, Scientific Reports, peer-reviewed)

Authors (10)

Lei Xin, Bin Ma, Baozhen Shan, Jing Zhang, Weiwu Chen, Mingjie Xie, Denis Yuen, Weiming Zhang, Zefeng Zhang, Gilles Lajoie

Seen in the charts

• The architectures
• Models and the authors behind them

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