Shotgun Protein Sequencing

algorithm · Spectral assembly

Shotgun Protein Sequencing: algorithm · Spectral assembly. Assembly of overlapping tandem mass spectra for shotgun protein sequencing.

Assembly of overlapping tandem mass spectra for shotgun protein sequencing.

Kind	algorithm
Family	Spectral assembly
Deep learning	no
Acquisition	DDA
Also known as	SPS

Papers

• Automated de novo protein sequencing of monoclonal antibodies (2008, Nature Biotechnology, peer-reviewed)
• Shotgun Protein Sequencing by Tandem Mass Spectra Assembly (2004, Analytical Chemistry, peer-reviewed)

Authors (7)

Nuno Bandeira, Haixu Tang, Vineet Bafna, Pavel A. Pevzner, Vineet Pham, David Arnott, Jennie R. Lill

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