A comprehensive LFQ benchmark dataset to validate data analysis pipelines on modern day acquisition strategies in proteo
benchmark · DDA · 1 version · 3 papers
A comprehensive LFQ benchmark dataset to validate data analysis pipelines on modern day acquisition strategies in proteomics
| Kind | benchmark |
| Acquisition | DDA |
| Organisms | Candida albicans (yeast), Escherichia coli, Homo sapiens (human) |
A comprehensive LFQ benchmark dataset to validate data analysis pipelines on modern day acquisition strategies in proteomics
Versions
as deposited
released 2021-09-24
Where it lives:
- PRIDE · PXD028735
Used by (3)
- A procedure for controlling the false discovery rate of de novo peptide sequencing (2025) preprint as deposited
- Limitations of de novo sequencing in resolving sequence ambiguity (2025) preprint as deposited
- A learned score function improves the power of mass spectrometry database search (2024) preprint as deposited
Methods on these papers (3)
- Casanovo-DB adjacent
- De novo FDR control procedure post-processor
- De novo sequence-ambiguity benchmark benchmark
Taken from the describing links only, so a paper that merely ran a tool on this data does not make that tool a method of it.