Karolinska Institutet
Stockholm, Sweden · 24 authors
Karolinska Institutet (Stockholm, Sweden): 24 authors and 25 papers in the de novo peptide sequencing catalog.
Departments
- Department of Medicinal Biochemistry and Biophysics
Papers (25)
- AI proteomics: from protein identification to virtual cells (2026, Nature Methods)
- π-MSNet: A billion-scale, AI-ready living proteomics data portal (2026, bioRxiv)
- EThcD as a Unique Tool for the Top-Down De Novo Sequencing of Intact Natural Ranid Amphibian Peptides (2024, Analytical Chemistry)
- Tandem Mass Spectrometry de novo Sequencing of the Skin Defense Peptides of the Central Slovenian Agile Frog Rana dalmatina (2023, Molecules)
- Mass spectrometry in de novo sequencing of the skin peptides from Arkhangelsk, Russia Rana temporaria: The variability of secreted AMPs in different populations (2023, International Journal of Mass Spectrometry)
- SpotLight Proteomics—A IgG-Enrichment Phenotype Profiling Approach with Clinical Implications (2019, International Journal of Molecular Sciences)
- SpotLight Proteomics: uncovering the hidden blood proteome improves diagnostic power of proteomics (2017, Scientific Reports)
- Subset of Kappa and Lambda Germline Sequences Result in Light Chains with a Higher Molecular Mass Phenotype (2015, Journal of Proteome Research)
- Novel proline-hydroxyproline glycopeptides from the dandelion (Taraxacum officinale Wigg.) flowers: de novo sequencing and biological activity (2015, Plant Science)
- Mass spectrometric de novo sequencing of natural non‐tryptic peptides: comparing peculiarities of collision‐induced dissociation (CID) and high energy collision dissociation (HCD) (2014, Rapid Communications in Mass Spectrometry)
- Introducing an Asp-Pro Linker in the Synthesis of Random One-Bead-One-Compound Hexapeptide Libraries Compatible with ESI-MS Analysis (2012, ACS Combinatorial Science)
- De novo sequencing of peptides secreted by the skin glands of the Caucasian Green Frog Rana ridibunda (2008, Rapid Communications in Mass Spectrometry)
- Relative Specificities of Water and Ammonia Losses from Backbone Fragments in Collision-Activated Dissociation (2007, Journal of Proteome Research)
- De Novo Peptide Sequencing and Identification with Precision Mass Spectrometry (2007, Journal of Proteome Research)
- Protein primary structure using orthogonal fragmentation techniques in Fourier transform mass spectrometry (2006, Expert Review of Proteomics)
- Proteomics-Grade de Novo Sequencing Approach (2005, Journal of Proteome Research)
- Identification of Protein Modifications Using MS/MS de Novo Sequencing and the OpenSea Alignment Algorithm (2005, Journal of Proteome Research)
- Database independent detection of isotopically labeled MS/MS spectrum peptide pairs (2005, Journal of Chromatography B)
- High-Throughput Identification of Proteins and Unanticipated Sequence Modifications Using a Mass-Based Alignment Algorithm for MS/MS de Novo Sequencing Results (2004, Analytical Chemistry)
- De novo sequencing of antimicrobial peptides isolated from the venom glands of the wolf spider Lycosa singoriensis (2004, Journal of Mass Spectrometry)
- Secondary Losses via γ-Lactam Formation in Hot Electron Capture Dissociation: A Missing Link to Complete de Novo Sequencing of Proteins? (2003, Journal of the American Chemical Society)
- Automated de novo sequencing of proteins by tandem high-resolution mass spectrometry (2000, Proceedings of the National Academy of Sciences)
- De novo sequencing of proteolytic peptides by a combination of C-terminal derivatization and nano-electrospray/ collision-induced dissociation mass spectrometry (2000, Journal of the American Society for Mass Spectrometry)
- Automated interpretation of low-energy collision-induced dissociation spectra by SeqMS, a software aid for de novo sequencing by tandem mass spectrometry (2000, Electrophoresis)
- Automated interpretation of high-energy collision-induced dissociation spectra of singly protonated peptides by ‘seqms’, a software aid forde novo sequencing by tandem mass spectrometry (1998, Rapid Communications in Mass Spectrometry)