Delineating the venom toxin arsenal of Malabar pit viper (Trimeresurus malabaricus) from the Western Ghats of India and evaluating its immunological cross-reactivity and in vitro cytotoxicity
peer-reviewed · International Journal of Biological Macromolecules · 2020
peer-reviewed · International Journal of Biological Macromolecules · 2020. Muralidharan Vanuopadath et al.
| Date | 2020-01-23 |
| Type | peer-reviewed |
| Venue | International Journal of Biological Macromolecules |
| Publisher | Elsevier |
| Contribution | downstream-application |
| DOI | 10.1016/j.ijbiomac.2020.01.226 |
| Citations (OpenAlex) | 28 |
Methods and tools
- Malabar pit viper venomics: Venomics workflow combining SDS-PAGE and ion-exchange pre-fractionation with LC-MS/MS + Novor and PEAKS de novo sequencing to identify 97 proteins (including 18 exclusive to de novo) from Trimeresurus malabaricus venom, and evaluate antivenom cross-reactivity.
- Novor: Real-time decision-tree scoring
- PEAKS: Commercial DP-based de novo