Lukas Käll

5 papers in the catalog · Sweden

Lukas Käll: 5 papers in the catalog · Sweden · KTH Royal Institute of Technology · Works on Casanovo, Living proteomics benchmark, Pairwise

Affiliations

KTH Royal Institute of Technology · Science for Life Laboratory, Department of Gene Technology

Elsewhere

ORCID 0000-0001-5689-9797

Papers

Reference-free protein sequencing by consensus assembly of redundant de novo peptide reads (2026, bioRxiv)
A living proteomics benchmark for comprehensive evaluation of deep learning-based de novo peptide sequencing tools (2026, Nature Methods (Registered Report))
Pairwise Attention: Leveraging Mass Differences to Enhance De Novo Sequencing of Mass Spectra (2025, Journal of Proteome Research)
Simultaneous polyclonal antibody sequencing and epitope mapping by cryo electron microscopy and mass spectrometry (2025, eLife)
Pairwise Attention: Leveraging Mass Differences to Enhance De Novo Sequencing of Mass Spectra (2025, bioRxiv)

Methods and tools

Casanovo, Living proteomics benchmark, Pairwise, borgonovo, cryoEM + MS antibody sequencing workflow

Co-authors (57)

Ranked by Newman fractional collaboration strength, so a pair on a two-author paper counts for more than a pair on a 50-author consortium paper.

Alfred Nilsson strength 0.89, 4 shared
Joel Lapin strength 0.69, 3 shared
Mathias Wilhelm strength 0.69, 3 shared
Douwe Schulte strength 0.53, 2 shared
Joost Snijder strength 0.53, 2 shared
Marta Šiborová strength 0.33, 1 shared
Emil Sporre strength 0.20, 1 shared
Fredrik Edfors strength 0.20, 1 shared
Baozhen Shan strength 0.02, 1 shared
Benjamin A. Neely strength 0.02, 1 shared
Bin Ma strength 0.02, 1 shared
Ceder Dens strength 0.02, 1 shared
Charlotte Adams strength 0.02, 1 shared
Cheng Chang strength 0.02, 1 shared
Cheng Ge strength 0.02, 1 shared
Chenyu Yao strength 0.02, 1 shared
Christian Nix strength 0.02, 1 shared
Daniela Klaproth-Andrade strength 0.02, 1 shared
Di Zhang strength 0.02, 1 shared
Ekapol Chuangsuwanich strength 0.02, 1 shared
Guillaume Deflandre strength 0.02, 1 shared
Haipeng Wang strength 0.02, 1 shared
Haixu Tang strength 0.02, 1 shared
Jeroen Van Goey strength 0.02, 1 shared
Jingbo Zhou strength 0.02, 1 shared
Julien Gagneur strength 0.02, 1 shared
Jun Xia strength 0.02, 1 shared
Kaiyuan Liu strength 0.02, 1 shared
Konstantinos Kalogeropoulos strength 0.02, 1 shared
Laurent Gatto strength 0.02, 1 shared
Lei Xin strength 0.02, 1 shared
Marina Pominova strength 0.02, 1 shared
Melih Yilmaz strength 0.02, 1 shared
Michael R. Shortreed strength 0.02, 1 shared
Ming Li strength 0.02, 1 shared
Qingyang Xiao strength 0.02, 1 shared
Qixin Liu strength 0.02, 1 shared
Ruitao Wu strength 0.02, 1 shared
Shan Chang strength 0.02, 1 shared
Shaorong Chen strength 0.02, 1 shared

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