Marina Pominova

3 papers in the catalog · Belgium

Marina Pominova: 3 papers in the catalog · Belgium · University of Antwerp · Works on Casanovo, Deep Learning Methods for De Novo Peptide Sequencing, Living proteomics benchmark

Affiliations

• University of Antwerp · Department of Computer Science

Elsewhere

ORCID 0009-0002-5449-3069 · OpenAlex

Papers

• A living proteomics benchmark for comprehensive evaluation of deep learning-based de novo peptide sequencing tools (2026, Nature Methods (Registered Report))
• Improvements to Casanovo, a Deep Learning De Novo Peptide Sequencer (2025, Journal of Proteome Research)
• Deep Learning Methods for De Novo Peptide Sequencing (2024, Mass Spectrometry Reviews)

Methods and tools

Casanovo, Deep Learning Methods for De Novo Peptide Sequencing, Living proteomics benchmark

Co-authors (62)

Ranked by Newman fractional collaboration strength, so a pair on a two-author paper counts for more than a pair on a 50-author consortium paper.

• Melih Yilmaz strength 0.22, 3 shared
• William E. Fondrie strength 0.22, 3 shared
• William Stafford Noble strength 0.22, 3 shared
• Wout Bittremieux strength 0.22, 3 shared
• Bo Wen strength 0.20, 2 shared
• Justin Sanders strength 0.20, 2 shared
• Varun Ananth strength 0.20, 2 shared
• Carlo F. Melendez strength 0.12, 1 shared
• Daniela Klaproth-Andrade strength 0.09, 2 shared
• Chris Hsu strength 0.07, 1 shared
• Gwenneth Straub strength 0.07, 1 shared
• Lingwen Xu strength 0.07, 1 shared
• Michael J. MacCoss strength 0.07, 1 shared
• Michael Riffle strength 0.07, 1 shared
• Sewoong Oh strength 0.07, 1 shared
• Alfred Nilsson strength 0.02, 1 shared
• Baozhen Shan strength 0.02, 1 shared
• Benjamin A. Neely strength 0.02, 1 shared
• Bin Ma strength 0.02, 1 shared
• Ceder Dens strength 0.02, 1 shared
• Charlotte Adams strength 0.02, 1 shared
• Cheng Chang strength 0.02, 1 shared
• Cheng Ge strength 0.02, 1 shared
• Chenyu Yao strength 0.02, 1 shared
• Christian Nix strength 0.02, 1 shared
• Di Zhang strength 0.02, 1 shared
• Ekapol Chuangsuwanich strength 0.02, 1 shared
• Guillaume Deflandre strength 0.02, 1 shared
• Haipeng Wang strength 0.02, 1 shared
• Haixu Tang strength 0.02, 1 shared
• Jeroen Van Goey strength 0.02, 1 shared
• Jingbo Zhou strength 0.02, 1 shared
• Joel Lapin strength 0.02, 1 shared
• Julien Gagneur strength 0.02, 1 shared
• Jun Xia strength 0.02, 1 shared
• Kaiyuan Liu strength 0.02, 1 shared
• Konstantinos Kalogeropoulos strength 0.02, 1 shared
• Laurent Gatto strength 0.02, 1 shared
• Lei Xin strength 0.02, 1 shared
• Lukas Käll strength 0.02, 1 shared

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