Kira Vyatkina
9 papers in the catalog · Russia, St. Petersburg
Kira Vyatkina: 9 papers in the catalog · Russia, St. Petersburg · ITMO University, Saint Petersburg Academic University · Works on Abiogenic glutamic acid homo-peptide sequencing, Bottom-up tag convolution, De novo sequencing of proteins and…
Affiliations
- ITMO University
- Saint Petersburg Academic University
- Saint Petersburg National Research Academic University of the Russian Academy of Sciences
- Saint Petersburg National Research Academic University of the Russian Academy of Sciences · Algorithmic Biology Laboratory
- Saint Petersburg State Electrotechnical University
- St Petersburg University
- St. Petersburg State University
- St. Petersburg State University · Center for Algorithmic Biotechnology, Institute of Translational Biomedicine
Elsewhere
Papers
- Application of Top-Down Deconvolution Tools to Bottom-Up Mass Spectrometry Data: Advantages and Limitations (2022, Springer Proceedings in Physics)
- Validation of De Novo Peptide Sequences with Bottom-Up Tag Convolution (2021, Proteomes)
- De Novo Sequencing of Proteins and Peptides: Algorithms, Applications, Perspectives (2018, Biomedical Chemistry: Research and Methods)
- De Novo Sequencing of Peptides from High‐Resolution Bottom‐Up Tandem Mass Spectra using Top‐Down Intended Methods (2017, PROTEOMICS)
- De Novo Sequencing of Top-Down Tandem Mass Spectra: A Next Step towards Retrieving a Complete Protein Sequence (2017, Proteomes)
- Top-down analysis of protein samples by de novo sequencing techniques (2016, Bioinformatics)
- De Novo Sequencing of Peptides from Top-Down Tandem Mass Spectra (2015, Journal of Proteome Research)
- De Novo Protein Sequencing by Combining Top-Down and Bottom-Up Tandem Mass Spectra (2014, Journal of Proteome Research)
- Application of de novo sequencing tools to study abiogenic peptide formations by tandem mass spectrometry. The case of homo‐peptides from glutamic acid complicated by substitutions of hydrogen by sodium or potassium atoms (2014, Rapid Communications in Mass Spectrometry)
Methods and tools
Abiogenic glutamic acid homo-peptide sequencing, Bottom-up tag convolution, De novo sequencing of proteins and peptides (review), T-Bruijn graph top-down de novo sequencing, Top-down plus bottom-up de novo protein sequencing, Top-down protein analysis from de novo strings, Top-down tandem spectrum de novo sequencing