Zhi Jin

7 papers in the catalog · China

Zhi Jin: 7 papers in the catalog · China · Shanghai Artificial Intelligence Laboratory, Soochow University · Works on ContraNovo, CrossNovo, Living proteomics benchmark

Affiliations

Elsewhere

ORCID 0009-0009-5688-489X

Papers

A living proteomics benchmark for comprehensive evaluation of deep learning-based de novo peptide sequencing tools (2026, Nature Methods (Registered Report))
Bidirectional Representations Augmented Autoregressive Biological Sequence Generation (2025, NeurIPS 2025)
Distilling Non-Autoregressive Model Knowledge for Autoregressive De Novo Peptide Sequencing (2025, ICLR 2025)
π-PrimeNovo: an accurate and efficient non-autoregressive deep learning model for de novo peptide sequencing (2025, Nature Communications)
RankNovo: A Universal Reranking Approach for Robust De Novo Peptide Sequencing (2024, ICLR 2025)
π-PrimeNovo: an accurate and efficient non-autoregressive deep learning model for de novo peptide sequencing (2024, bioRxiv)
ContraNovo: A Contrastive Learning Approach to Enhance De Novo Peptide Sequencing (2024, AAAI 2024)

Methods and tools

ContraNovo, CrossNovo, Living proteomics benchmark, RankNovo, π-PrimeNovo

Co-authors (65)

Ranked by Newman fractional collaboration strength, so a pair on a two-author paper counts for more than a pair on a 50-author consortium paper.

Siqi Sun strength 0.69, 7 shared
Xiang Zhang (Shanghai AI Lab) strength 0.69, 7 shared
Nanqing Dong strength 0.67, 6 shared
Sheng Xu strength 0.67, 6 shared
Zhiqiang Gao strength 0.67, 6 shared
Zijie Qiu strength 0.54, 5 shared
Jiaqi Wei strength 0.41, 3 shared
Cheng Chang strength 0.28, 4 shared
Tianze Ling strength 0.28, 4 shared
Wanli Ouyang strength 0.26, 3 shared
Boyan Sun strength 0.13, 2 shared
Guangshuai Wang strength 0.13, 2 shared
Guibin Wang strength 0.13, 2 shared
Laks V.S. Lakshmanan strength 0.13, 2 shared
Leyuan Li strength 0.13, 2 shared
Muhammad Abdul-Mageed strength 0.13, 2 shared
Kai Zou strength 0.12, 1 shared
Alfred Nilsson strength 0.02, 1 shared
Baozhen Shan strength 0.02, 1 shared
Benjamin A. Neely strength 0.02, 1 shared
Bin Ma strength 0.02, 1 shared
Ceder Dens strength 0.02, 1 shared
Charlotte Adams strength 0.02, 1 shared
Cheng Ge strength 0.02, 1 shared
Chenyu Yao strength 0.02, 1 shared
Christian Nix strength 0.02, 1 shared
Daniela Klaproth-Andrade strength 0.02, 1 shared
Di Zhang strength 0.02, 1 shared
Ekapol Chuangsuwanich strength 0.02, 1 shared
Guillaume Deflandre strength 0.02, 1 shared
Haipeng Wang strength 0.02, 1 shared
Haixu Tang strength 0.02, 1 shared
Jeroen Van Goey strength 0.02, 1 shared
Jingbo Zhou strength 0.02, 1 shared
Joel Lapin strength 0.02, 1 shared
Julien Gagneur strength 0.02, 1 shared
Jun Xia strength 0.02, 1 shared
Kaiyuan Liu strength 0.02, 1 shared
Konstantinos Kalogeropoulos strength 0.02, 1 shared
Laurent Gatto strength 0.02, 1 shared

Seen in the charts

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