CrossNovo

algorithm · Transformer (NAR)

CrossNovo: algorithm · Transformer (NAR). AR + NAR hybrid

AR + NAR hybrid

Kind	algorithm
Family	Transformer (NAR)
Deep learning	yes
Acquisition	DDA

Code

• https://github.com/BEAM-Labs/denovo

Live stars, open issues and last-push figures are on the Code activity chart.

Papers

• Bidirectional Representations Augmented Autoregressive Biological Sequence Generation (2025, NeurIPS 2025, preprint)
• Distilling Non-Autoregressive Model Knowledge for Autoregressive De Novo Peptide Sequencing (2025, ICLR 2025, preprint)

Authors (8)

Xiang Zhang (Shanghai AI Lab), Jiaqi Wei, Zijie Qiu, Sheng Xu, Zhi Jin, Zhiqiang Gao, Nanqing Dong, Siqi Sun

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• Code activity
• Models and the authors behind them

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