π-PrimeNovo

algorithm · Transformer (NAR)

π-PrimeNovo: algorithm · Transformer (NAR). NAR Transformer (CTC)

NAR Transformer (CTC)

Kind	algorithm
Family	Transformer (NAR)
Deep learning	yes
Acquisition	DDA

Code

• https://github.com/BEAM-Labs/denovo/tree/main/PrimeNovo

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Papers

• π-PrimeNovo: an accurate and efficient non-autoregressive deep learning model for de novo peptide sequencing (2025, Nature Communications, peer-reviewed)
• π-PrimeNovo: an accurate and efficient non-autoregressive deep learning model for de novo peptide sequencing (2024, bioRxiv, preprint)

Authors (16)

Xiang Zhang (Shanghai AI Lab), Tianze Ling, Zhi Jin, Sheng Xu, Zhiqiang Gao, Boyan Sun, Zijie Qiu, Nanqing Dong, Guangshuai Wang, Guibin Wang, Leyuan Li, Muhammad Abdul-Mageed, Laks V.S. Lakshmanan, Wanli Ouyang, Cheng Chang, Siqi Sun

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