Bo Wen
9 papers in the catalog · USA
Bo Wen: 9 papers in the catalog · USA · Baylor College of Medicine, Baylor College of Medicine · Works on 9-species multi-species benchmark, Casanovo, CasanovoGUI
Affiliations
- Baylor College of Medicine · Department of Molecular and Human Genetics
- Baylor College of Medicine · Lester and Sue Smith Breast Center
- University of Washington · Department of Genome Sciences
Elsewhere
Papers
- CasanovoGUI: a cross-platform desktop application for deep learning-based de novo peptide sequencing with Casanovo (2026, bioRxiv)
- Improvements to Casanovo, a Deep Learning De Novo Peptide Sequencer (2025, Journal of Proteome Research)
- Improvements to CasaNovo, a deep learning de novo peptide sequencer (2025, bioRxiv)
- A transformer model for de novo sequencing of data independent acquisition mass spectrometry data (2025, Nature Methods)
- Deep Learning Methods for De Novo Peptide Sequencing (2024, Mass Spectrometry Reviews)
- A multi-species benchmark for training and validating mass spectrometry proteomics machine learning models (2024, Scientific Data)
- A multi-species benchmark for training and validating mass spectrometry proteomics machine learning models (2024, ChemRxiv)
- A transformer model for de novo sequencing of data independent acquisition mass spectrometry data (2024, bioRxiv)
- Deep Learning in Proteomics (2020, Proteomics)
Methods and tools
9-species multi-species benchmark, Casanovo, CasanovoGUI, Cascadia, Deep Learning Methods for De Novo Peptide Sequencing, Deep Learning in Proteomics