An Approach for Matching Mixture MS/MS Spectra with a Pair of Peptide Sequences in a Protein Database

peer-reviewed · Lecture Notes in Computer Science · 2015

peer-reviewed · Lecture Notes in Computer Science · 2015. Yi Liu et al.

Date	2015-04-29
Type	peer-reviewed
Venue	Lecture Notes in Computer Science
Publisher	Springer International Publishing
Contribution	algorithm
DOI	10.1007/978-3-319-19048-8_19
Citations (OpenAlex)	0
Venue 2-year citedness	1.54

Authors

1. Yi Liu · University of Western Ontario, Western University
2. Weiping Sun · Bioinformatics Solutions (Canada), Bioinformatics Solutions Inc., Western University
3. Gilles Lajoie · University of Western Ontario, Western University
4. Bin Ma · Rapid Novor Inc., University of Waterloo, University of Western Ontario, Western University
5. Kaizhong Zhang · University of Western Ontario, Western University

Methods and tools

• De novo assisted mixture spectrum characterization: Attacks the low identification rate caused by MIXTURE spectra, where more than one peptide co-fragments, by using de novo interpretation to characterize what the spectrum actually contains.

Cites (6)

• An Effective Algorithm for Peptide de novo Sequencing from Mixture MS/MS Spectra (2014) crossref
• PEAKS DB: De Novo Sequencing Assisted Database Search for Sensitive and Accurate Peptide Identification (2012) crossref
• De Novo Peptide Sequencing and Identification with Precision Mass Spectrometry (2007) crossref
• PEAKS: powerful software for peptide de novo sequencing by tandem mass spectrometry (2003) crossref
• Implementation and Uses of Automated de Novo Peptide Sequencing by Tandem Mass Spectrometry (2001) crossref
• Sequence database searches via de novo peptide sequencing by tandem mass spectrometry (1997) crossref

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