An Effective Algorithm for the Peptide De Novo Sequencing from MS/MS Spectrum
peer-reviewed · Lecture Notes in Computer Science · 2003
peer-reviewed · Lecture Notes in Computer Science · 2003. Bin Ma et al.
| Date | 2003-05-27 |
| Type | peer-reviewed |
| Venue | Lecture Notes in Computer Science |
| Publisher | Springer Berlin Heidelberg |
| Contribution | algorithm |
| DOI | 10.1007/3-540-44888-8_20 |
| Citations (OpenAlex) | 23 |
| Venue 2-year citedness | 1.54 |
Methods and tools
- PEAKS: Commercial DP-based de novo
Cites (7)
- A Dynamic Programming Approach to De Novo Peptide Sequencing via Tandem Mass Spectrometry (2001) crossref
- De novo peptide sequencing via tandem mass spectrometry (1999) crossref
- Sequence database searches via de novo peptide sequencing by tandem mass spectrometry (1997) crossref
- Error-Tolerant Identification of Peptides in Sequence Databases by Peptide Sequence Tags (1994) crossref
- Fast algorithm for peptide sequencing by mass spectroscopy (1990) crossref
- Computer program (SEQPEP) to aid in the interpretation of high-energy collision tandem mass spectra of peptides (1989) crossref
- PAAS 3: A computer program to determine probable sequence of peptides from mass spectrometric data (1984) crossref
Cited by (9)
- A better scoring model for de novo peptide sequencing: the symmetric difference between explained and measured masses (2017) both
- EigenMS: De Novo Analysis of Peptide Tandem Mass Spectra by Spectral Graph Partitioning (2010) crossref
- An Automata Approach to Match Gapped Sequence Tags Against Protein Database (2010) crossref
- Better score function for peptide identification with ETD MS/MS spectra (2010) semanticscholar
- An Ion Transformation Approach for De Novo Peptide Sequencing via Tandem Mass Spectra (2008) crossref
- Peptide Identification by Tandem Mass Spectra: An Efficient Parallel Searching (2006) crossref
- De Novo Analysis of Peptide Tandem Mass Spectra by Spectral Graph Partitioning (2006) crossref
- Algorithms for de novo peptide sequencing using tandem mass spectrometry (2004) crossref
- PEAKS: powerful software for peptide de novo sequencing by tandem mass spectrometry (2003) crossref