Journal of Proteome Research
25 papers in the catalog
25 de novo peptide sequencing papers published in Journal of Proteome Research, catalogued with authors, methods and citation counts.
| 2-year mean citedness | 3.48 |
| h-index | 221 |
| Works indexed | 11057 |
From OpenAlex. The 2-year mean citedness is computed the same way as the Journal Impact Factor, but over the open citation graph.
Papers
- Improvements to Casanovo, a Deep Learning De Novo Peptide Sequencer (2025, peer-reviewed)
- Pairwise Attention: Leveraging Mass Differences to Enhance De Novo Sequencing of Mass Spectra (2025, peer-reviewed)
- Accounting for Digestion Enzyme Bias in Casanovo (2024, peer-reviewed)
- NovoRank: Refinement for De Novo Peptide Sequencing Based on Spectral Clustering and Deep Learning (2022, peer-reviewed)
- Uncovering Hidden Members and Functions of the Soil Microbiome Using De Novo Metaproteomics (2022, peer-reviewed)
- Extended Snake Venomics by Top-Down In-Source Decay: Investigating the Newly Discovered Anatolian Meadow Viper Subspecies, Vipera anatolica senliki (2020, peer-reviewed)
- Postnovo: Postprocessing Enables Accurate and FDR-Controlled de Novo Peptide Sequencing (2018, peer-reviewed)
- SearchGUI: A Highly Adaptable Common Interface for Proteomics Search and de Novo Engines (2018, peer-reviewed)
- pSite: Amino Acid Confidence Evaluation for Quality Control of De Novo Peptide Sequencing and Modification Site Localization (2017, peer-reviewed)
- Combining De Novo Peptide Sequencing Algorithms, A Synergistic Approach to Boost Both Identifications and Confidence in Bottom-up Proteomics (2017, peer-reviewed)
- Open-pNovo: De Novo Peptide Sequencing with Thousands of Protein Modifications (2017, peer-reviewed)
- De Novo MS/MS Sequencing of Native Human Antibodies (2017, peer-reviewed)
- Application of de Novo Sequencing to Large-Scale Complex Proteomics Data Sets (2016, peer-reviewed)
- DeNovoGUI: An Open Source Graphical User Interface for de Novo Sequencing of Tandem Mass Spectra (2014, peer-reviewed)
- Sequencing-Grade De novo Analysis of MS/MS Triplets (CID/HCD/ETD) From Overlapping Peptides (2013, peer-reviewed)
- pNovo+: De Novo Peptide Sequencing Using Complementary HCD and ETD Tandem Mass Spectra (2013, peer-reviewed)
- Constrained De Novo Sequencing of Conotoxins (2012, peer-reviewed)
- pNovo: De novo Peptide Sequencing and Identification Using HCD Spectra (2010, peer-reviewed)
- DirecTag: Accurate Sequence Tags from Peptide MS/MS through Statistical Scoring (2008, peer-reviewed)
- De Novo Peptide Sequencing and Identification with Precision Mass Spectrometry (2007, peer-reviewed)
- Performance Evaluation of Existing De Novo Sequencing Algorithms (2006, peer-reviewed)
- Rapid Validation of Protein Identifications with the Borderline Statistical Confidence via De Novo Sequencing and MS BLAST Searches (2006, peer-reviewed)
- Proteomics-Grade de Novo Sequencing Approach (2005, peer-reviewed)
- AUDENS: A Tool for Automated Peptide de Novo Sequencing (2005, peer-reviewed)
- Identification of Protein Modifications Using MS/MS de Novo Sequencing and the OpenSea Alignment Algorithm (2005, peer-reviewed)