PointNovo

algorithm · CNN + RNN

PointNovo: algorithm · CNN + RNN. Point-set network

Point-set network

Kind	algorithm
Deep learning	yes
Acquisition	DDA
Family	CNN + RNN

Code

• https://github.com/irleader/PointNovo

Live stars, open issues and last-push figures are on the Code activity chart.

Papers describing it (2)

• Peptide Sequencing with Deep Learning (2020, thesis)
• Computationally instrument-resolution-independent de novo peptide sequencing for high-resolution devices (2021, Nature Machine Intelligence, peer-reviewed)

Papers using it (2)

Applications and evaluations that ran this method. They are not counted among its authors below.

• The Immunopeptidome from a Genomic Perspective: Establishing the Noncanonical Landscape of MHC Class I–Associated Peptides (2023, Cancer Immunology Research, peer-reviewed)
• Application of a Novel Hybrid CNN-GNN for Peptide Ion Encoding (2023, Journal of Proteome Research, peer-reviewed)

Authors (7)

Rui Qiao, Ngoc Hieu Tran, Lei Xin, Xin Chen (Waterloo), Ming Li, Baozhen Shan, Ali Ghodsi

Seen in the charts

• The architectures
• Code activity
• Models and the authors behind them

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